Plot function for a synergyscreen object

A function for plotting summary statistics of a synergyscreen object.

Usage

# S3 method for synergyscreen
plot(
  x,
  groupbyExperimentID = T,
  save_plots = FALSE,
  path = NULL,
  plotdevice = "pdf",
  ...
)

Arguments

x

An object of class synergyscreen, the result of synergyscreen.

groupbyExperimentID

logical; if TRUE, individual plots are produced per experiment ID.

save_plots

logical; if TRUE plots are saved locally.

path

string; path for saving plots, if NULL defaults to work directory.

plotdevice

string; device for saving plots locally, must be 'pdf' or 'png'

...

further arguments passed on to device for plotting, useful for setting width and height of saved plots.

Details

This function extends plot to summarize results from large screens.

Examples

if (FALSE) {
library(bayesynergy)
data("mathews_DLBCL")
experiment1 = list(y = mathews_DLBCL[[1]][[1]],
x = mathews_DLBCL[[1]][[2]],
drug_names = c("ispinesib","ibrutinib"))
experiment2 = list(y = mathews_DLBCL[[2]][[1]],
x = mathews_DLBCL[[2]][[2]],
drug_names = c("canertinib","ibrutinib"))
experiments = list(experiment1,experiment2)
fit <- synergyscreen(experiments)
plot(fit)
}